Publications of qmwugbt112 [rss]
2011
[82] Next generation sequencing reveals genome downsizing in allotetraploid Nicotiana tabacum, predominantly through the elimination of paternally derived repetitive DNAs. (Simon Renny-Byfield, Michael Chester, Ales Kovarík, Steven C Le Comber, Marie-Angèle A Grandbastien, Marc Deloger, Richard A Nichols, Jiri Macas, Petr Novák, Mark W Chase, Andrew R Leitch, A Kovařík), In Mol Biol Evol, volume 28, 2011. [bib] [pdf] [doi]
[81] Household size is critical to varicella-zoster virus transmission in the tropics despite lower viral infectivity. (R A Nichols, K T Averbeck, A G Poulsen, M M al Bassam, F Cabral, P Aaby, J Breuer), In Epidemics, volume 3, 2011. [bib] [doi]
[80] Population diversity in batches of the varicella Oka vaccine (R K Kanda, M L Quinlivan, A A Gershon, R A Nichols, J Breuer), In VACCINE, volume 29, 2011. [bib] [doi]
[79] Stops making sense: translational trade-offs and stop codon reassignment. (L J Johnson, J A Cotton, C P Lichtenstein, G S Elgar, R A Nichols, P D Polly, S C Le Comber), In BMC Evol Biol, volume 11, 2011. [bib] [doi]
[78] Predictions of single-nucleotide polymorphism differentiation between two populations in terms of mutual information. (R C Dewar, W B Sherwin, E Thomas, C E Holleley, R A Nichols), In Mol Ecol, volume 20, 2011. [bib] [doi]
[77] Phylogenetic relationships in Pterodroma petrels are obscured by recent secondary contact and hybridization. (R M Brown, W C Jordan, C G Faulkes, C G Jones, L Bugoni, V Tatayah, R L Palma, R A Nichols), In PLoS One, volume 6, 2011. [bib] [doi]
[76] Getting Started with Mendeley (The Mendeley Support Team), Mendeley Ltd., 2011. [bib] [pdf]
2010
[75] Range expansion and hybridization in Round Island petrels (Pterodroma spp.): evidence from microsatellite genotypes. (R M Brown, R A Nichols, C G Faulkes, C G Jones, L Bugoni, V Tatayah, D Gottelli, W C Jordan), In Mol Ecol, volume 19, 2010. [bib] [doi]
2009
[74] Geographically localised bursts of ribosomal DNA mobility in the grasshopper Podisma pedestris. (P Veltsos, I Keller, R A Nichols), In Heredity (Edinb), volume 103, 2009. [bib] [doi]
[73] Population genetic patterns suggest a behavioural change in wild common frogs (Rana temporaria) following disease outbreaks (Ranavirus) (A G F Teacher, T W J Garner, R A Nichols), In MOL ECOL, volume 18, 2009. [bib] [doi]
[72] Evidence for directional selection at a novel major histocompatibility class I marker in wild common frogs (Rana temporaria) exposed to a viral pathogen (Ranavirus). (A G Teacher, T W Garner, R A Nichols), In PLoS One, volume 4, 2009. [bib] [doi]
[71] European phylogeography of the common frog (Rana temporaria): routes of postglacial colonization into the British Isles, and evidence for an Irish glacial refugium. (A G Teacher, T W Garner, R A Nichols), In Heredity (Edinb), volume 102, 2009. [bib] [doi]
[70] Induced dispersal in wildlife management: experimental evaluation of the risk of hybrid breakdown and the benefit of hybrid vigor in the F1 generation (Clare E. Holleley, Richard a. Nichols, Michael R. Whitehead, Melissa R. Gunn, Jyoutsna Gupta, William B. Sherwin), In Conservation Genetics, volume 12, 2009. [bib] [pdf] [doi]
2008
[69] The inexorable spread of a newly arisen neo-Y chromosome. (P Veltsos, I Keller, R A Nichols), In PLoS Genet, volume 4, 2008. [bib] [doi]
[68] The role of vicariance vs. dispersal in shaping genetic patterns in ocellated lizard species in the western Mediterranean (O. S. Paulo, J. Pinheiro, a. Miraldo, M. W. Bruford, W. C. Jordan, R. a. Nichols), In MOL ECOL, volume 17, 2008. [bib] [pdf] [doi]
[67] The frequency of rDNA variants within individuals provides evidence of population history and gene flow across a grasshopper hybrid zone. (Irene Keller, Paris Veltsos, Richard A Nichols), In Evolution, volume 62, 2008. [bib] [pdf] [doi]
2007
[66] Landscape, habitat characteristics and the genetic population structure of two caddisflies (H R Wilcock, M W Bruford, R A Nichols, A G Hildrew), In FRESHWATER BIOL, volume 52, 2007. [bib] [doi]
[65] Natural selection for rash-forming genotypes of the varicella-zoster vaccine virus detected within immunized human hosts. (Mark L Quinlivan, Anne a Gershon, Mahmoud M Al Bassam, Sharon P Steinberg, Philip LaRussa, Richard A Nichols, Judith Breuer), In Proceedings of the National Academy of Sciences of the United States of America, volume 104, 2007. [bib] [pdf] [doi]
[64] Dates from the molecular clock: how wrong can we be? (Mário J F Pulquério, Richard A Nichols), In Trends Ecol Evol, volume 22, 2007. [bib] [pdf] [doi]
[63] Transition-transversion bias is not universal: a counter example from grasshopper pseudogenes. (I Keller, D Bensasson, R A Nichols), In PLoS Genet, volume 3, 2007. [bib] [doi]
[62] DNA sequence variability in Oka vaccine isolates (Judith Breuer, Mark Quinlivan, Mahmoud Al Bassam, Susannah Macdonald, Richard A Nichols, Sharon P Steinberg, P La Russa, Anne a Gershon, Philip La Russa), In J INFECT DIS, volume 196, 2007. [bib] [pdf] [doi]
2006
[61] 400 Hepatitis B virus mutations involved in clinical outcome (C Szmaragd, G R Foster, A Manica, A Bartholomeusz, R A Nichols, F Balloux), In JOURNAL OF HEPATOLOGY, volume 44, 2006. [bib]
[60] Genome-wide characterisation of Hepatitis B mutations involved in clinical outcome (C Szmaragd, G R Foster, A Manica, A Bartholomeusz, R A Nichols, F Balloux), In HEREDITY, volume 97, 2006. [bib] [doi]
[59] A novel approach to characterise pathogen candidate genetic polymorphisms involved in clinical outcome (C Szmaragd, R A Nichols, F Balloux), In INFECT GENET EVOL, volume 6, 2006. [bib] [doi]
[58] Morphological differentiation following experimental bottlenecks in the butterfly Bicyclus anynana (Nymphalidae) (I J Saccheri, R A Nichols, P M Brakefield), In BIOL J LINN SOC, volume 89, 2006. [bib]
[57] Vaccine Oka varicella-zoster virus genotypes are monomorphic in single vesicles and polymorphic in respiratory tract secretions (M A Quinlivan, A A Gershon, R A Nichols, P La Russa, S P Steinberg, J Breuer), In J INFECT DIS, volume 193, 2006. [bib]
[56] Ribosomal DNA in the grasshopper Podisma pedestris: escape from concerted evolution. (I Keller, I C Chintauan-Marquier, P Veltsos, R A Nichols), In Genetics, volume 174, 2006. [bib] [doi]
2005
[55] Recruitment, kin and the spatial genetic structure of a caddisfly Plectrocnemia conspersa in a southern English stream (H R Wilcock, M W Bruford, A G Hildrew, R A Nichols), In FRESHWATER BIOL, volume 50, 2005. [bib] [doi]
[54] Genetic and Evolutionary Impacts of Climate Change (G M Hewitt, R A NICHOLS), Chapter in Climate Change and Biodiversity (T E Lovejoy, L Hannah, eds.), Yale University Press, 2005. [bib]
2004
[53] The origin and evolution of geminivirus-related DNA sequences in Nicotiana. (L Murad, J P Bielawski, R Matyasek, A Kovarík, R A Nichols, A R Leitch, C P Lichtenstein), In Heredity (Edinb), volume 92, 2004. [bib] [doi]
[52] Molecular phylogeny and morphological change in the Psittacula parakeets. (J J Groombridge, C G Jones, R A Nichols, M Carlton, M W Bruford), In Mol Phylogenet Evol, volume 31, 2004. [bib] [doi]
2003
[51] Genetic population structure and neighbourhood population size estimates of the caddisfly Plectrocnemia conspersa (H R Wilcock, R A Nichols, A G Hildrew), In FRESHWATER BIOL, volume 48, 2003. [bib]
[50] An analysis of consanguinity and social structure within the UK Asian population using microsatellite data. (A D Overall, M Ahmad, M G Thomas, R A Nichols), In Ann Hum Genet, volume 67, 2003. [bib]
[49] Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis. (S J Hinchliffe, K E Isherwood, R A Stabler, M B Prentice, A Rakin, R A Nichols, P C Oyston, J Hinds, R W Titball, B W Wren), In Genome Res, volume 13, 2003. [bib] [doi]
2002
[48] Using nested clade analysis to assess the history of colonization and the persistence of populations of an Iberian Lizard (Cathays Park, Queen Mary, O S Paulo, W C Jordan, M W Bruford, R A Nichols), In MOL ECOL, volume 11, 2002. [bib]
[47] The double origin of Iberian peninsular chameleons (O S Paulo, I Pinto, M W Bruford, W C Jordan, R A Nichols), In BIOL J LINN SOC, volume 75, 2002. [bib]
[46] The effect of reproductive compensation on recessive disorders within consanguineous human populations. (A D Overall, M Ahmad, R A Nichols), In Heredity (Edinb), volume 88, 2002. [bib]
[45] Phylogenetic analysis of varicella-zoster virus: Evidence of intercontinental spread of genotypes and recombination (W B Muir, R Nichols, J Breuer), In J VIROL, volume 76, 2002. [bib] [doi]
[44] A molecular phylogeny of African kestrels with reference to divergence across the Indian Ocean (J J Groombridge, C G Jones, M K Bayes, A J van Zyl, J Carrillo, R A Nichols, M W Bruford), In MOL PHYLOGENET EVOL, volume 25, 2002. [bib]
[43] Patterns of colonization in a metapopulation of grey seals (O E Gaggiotti, F Jones, W M Lee, W Amos, J Harwood, R A Nichols), In NATURE, volume 416, 2002. [bib]
[42] Y genetic data support the Neolithic demic diffusion model (L Chikhi, R A Nichols, G Barbujani, M A Beaumont), In P NATL ACAD SCI USA, volume 99, 2002. [bib] [doi]
2001
[41] Microsatellites for the net-spinning caddisfly Plectrocnemia conspersa ( Polycentropodidae ) (H R Wilcock, A G Hildrew, R A Nichols, M W Bruford, Primer Note), In Molecular Ecology Notes, volume 1, 2001. [bib]
[40] Genetic differentiation of a European caddisfly: past and present gene flow among fragmented larval habitats. (H R Wilcock, A G Hildrew, R A Nichols), In Mol Ecol, volume 10, 2001. [bib] [pdf]
[39] Effects of bottlenecks on quantitative genetic variation in the butterfly Bicyclus anynana (I J Saccheri, R A Nichols, P M Brakefield), In GENET RES, volume 77, 2001. [bib]
[38] The persistence of Pliocene populations through the Pleistocene climatic cycles: evidence from the phylogeography of an Iberian lizard (O S Paulo, C Dias, M W Bruford, W C Jordan, R A Nichols), In P ROY SOC LOND B BIO, volume 268, 2001. [bib]
[37] Sustaining genetic variation in a small population: evidence from the Mauritius kestrel (R A Nichols, M W Bruford, J J Groombridge), In MOLECULAR ECOLOGY, volume 10, 2001. [bib] [pdf]
[36] Gene trees and species trees are not the same. (R Nichols), In Trends Ecol Evol, volume 16, 2001. [bib]
[35] Evaluating the severity of the population bottleneck in the Mauritius kestrel Falco punctatus from ringing records using MCMC estimation (J J Groombridge, M W Bruford, C G Jones, R A Nichols), In J ANIM ECOL, volume 70, 2001. [bib]
[34] Mating patterns, relatedness and the basis of natal philopatry in the brown long-eared bat, Plecotus auritus (T M Burland, E M Barratt, R A Nichols, P a Racey), In MOL ECOL, volume 10, 2001. [bib] [pdf]
[33] A method for distinguishing consanguinity and population substructure using multilocus genotype data. (A D J Overall, R A Nichols), In Molecular biology and evolution, volume 18, 2001. [bib] [pdf]
2000
[32] Conservation biology - ‘Ghost’ alleles of the Mauritius kestrel (J J Groombridge, C G Jones, M W Bruford, R A Nichols), In NATURE, volume 403, 2000. [bib] [pdf] [doi]
1999
[31] Inbreeding of bottlenecked butterfly populations: Estimation using the likelihood of changes in marker allele frequencies (I J Saccheri, I J Wilson, R A Nichols, M W Bruford, P M Brakefield), In GENETICS, volume 151, 1999. [bib]
[30] The introduction of molecular genetic techniques into forensic science (R A NICHOLS), Chapter in Biotechnology, the Science $\backslash$$\backslash$& the business (SDMMC RE, ed.), Harwood Academic Publishers, 1999. [bib]
[29] Minisatellite mutational processes reduce F-st estimates (J Flint, J Bond, D C Rees, A J Boyce, J M Roberts-Thomson, L Excoffier, J B Clegg, M A Beaumont, R A Nichols, R M Harding), In HUM GENET, volume 105, 1999. [bib]
[28] Culex pipiens in London Underground tunnels: differentiation between surface and subterranean populations. (K Byrne, R A Nichols), In Heredity (Edinb), volume 82 ( Pt 1), 1999. [bib]
1997
[27] Population structure and insecticidal control of the sawtoothed grain beetle (Coleoptera: Silvanidae) under simulated field conditions (P L Mason, R J Brown, R A Nichols), In J ECON ENTOMOL, volume 90, 1997. [bib]
[26] Genetic differentiation between and within strains of the saw-toothed grain beetle, Oryzaephilus surinamensis (Coleoptera: Silvanidae) at RAPD loci. (R J Brown, C a Malcolm, P L Mason, R A Nichols), In Insect Mol Biol, volume 6, 1997. [bib] [pdf]
[25] Significant genetic correlations among Caucasians at forensic DNA loci. (D J Balding, R A Nichols), In Heredity (Edinb), volume 78 ( Pt 6), 1997. [bib]
1996
[24] Is it ancient or modern history that we can read in the genes? (R A NICHOLS), Chapter in Aspects of the Genesis and Maintenance of Biological Diversity (M E Hochberg, J Clobert, R Barbault, eds.), Oxford University Press, 1996. [bib]
[23] Assessing relatedness and evolutionary divergence: why the genetic evidence alone is not enough. (R A NICHOLS), Chapter in Molecular Genetic Approaches in Conservation (S T W RK, ed.), Oxford University Press, 1996. [bib]
[22] Spatial patterns of genetic variation generated by different forms of dispersal during range expansion (K M Ibrahim, R A Nichols, G M Hewitt), In HEREDITY, volume 77, 1996. [bib]
[21] Population genetics of STR loci in Caucasians. (D J Balding, M Greenhalgh, R A Nichols), In Int J Legal Med, volume 108, 1996. [bib]
[20] Severe inbreeding depression and rapid fitness rebound in the butterfly Bicyclus anynana (Satyridae) (I.J. Saccheri, P.M. Brakefield, R.A. Nichols), In Evolution, JSTOR, volume 50, 1996. [bib] [pdf]
[19] Spatial patterns of genetic variation generated by different forms of dispersal during range expansion (K.M. Ibrahim, R.A. Nichols, G.M. Hewitt), In Heredity, volume 77, 1996. [bib] [pdf]
1995
[18] PHILOPATRY IN THE ALPINE GRASSHOPPER, PODISMA-PEDESTRIS - A NOVEL EXPERIMENTAL AND ANALYTICAL METHOD (P L MASON, R A NICHOLS, G M HEWITT), In ECOL ENTOMOL, volume 20, 1995. [bib]
[17] A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternity. (D J Balding, R A Nichols), In Genetica, volume 96, 1995. [bib]
1994
[16] THE GENETIC CONSEQUENCES OF LONG-DISTANCE DISPERSAL DURING COLONIZATION (R A NICHOLS, G M HEWITT), In HEREDITY, volume 72, 1994. [bib]
[15] Comment: SOME CAUSES FOR CONCERN ABOUT DNA PROFILES - COMMENT (David J BALDING, Peter DONNELLY, Richard A NICHOLS), In Statistics, volume 9, 1994. [bib]
[14] DNA profile match probability calculation: how to allow for population stratification, relatedness, database selection and single bands. (D J Balding, R A Nichols), In Forensic Sci Int, volume 64, 1994. [bib]
1992
[13] SEXUAL PREFERENCE AND GENETIC CORRELATIONS (R A NICHOLS, R K BUTLIN), In TRENDS ECOL EVOL, volume 7, 1992. [bib]
[12] Detecting gene conversion: primate visual pigment genes. (D J Balding, R A Nichols, D M Hunt), In Proc Biol Sci, volume 249, 1992. [bib] [doi]
1991
[11] Effects of population structure on DNA fingerprint analysis in forensic science. (R A Nichols, D J Balding), In Heredity (Edinb), volume 66 ( Pt 2), 1991. [bib]
1989
[10] THE FRAGMENTATION OF TENSION ZONES IN SPARSELY POPULATED AREAS (R.A. Nichols), In AM NAT, volume 134, 1989. [bib]
[9] MITOCHONDRIAL-DNA CLUES TO GOPHER TORTOISE DISPERSAL (Richard A NICHOLS), In TRENDS ECOL EVOL, volume 4, 1989. [bib]
[8] DOES RUNAWAY SEXUAL SELECTION WORK IN FINITE POPULATIONS (R A NICHOLS, R K BUTLIN), In J EVOLUTION BIOL, volume 2, 1989. [bib]
[7] SPERM PRECEDENCE AND HOMOGAMY ACROSS A HYBRID ZONE IN THE ALPINE GRASSHOPPER PODISMA-PEDESTRIS (G M HEWITT, P MASON, R A NICHOLS), In HEREDITY, volume 62, 1989. [bib]
1988
[6] GENETIC AND ECOLOGICAL DIFFERENTIATION ACROSS A HYBRID ZONE (R A NICHOLS, G M HEWITT), In ECOL ENTOMOL, volume 13, 1988. [bib]
[5] EVOLUTION AT A SNAILS PACE (R.A. Nichols), In TRENDS ECOL EVOL, volume 3, 1988. [bib]
[4] ECOLOGICAL GENETICS - 1868 AND ALL THAT FOR MAGICICADA (G M HEWITT, R A NICHOLS, M G RITCHIE), In NATURE, volume 336, 1988. [bib]
1987
[3] HOMOGAMY IN A HYBRID ZONE IN THE ALPINE GRASSHOPPER PODISMA-PEDESTRIS (G M HEWITT, R A NICHOLS, N H BARTON), In HEREDITY, volume 59, 1987. [bib]
1986
[2] POPULATION-STRUCTURE AND THE SHAPE OF A CHROMOSOMAL CLINE BETWEEN 2 RACES OF PODISMA-PEDESTRIS (ORTHOPTERA, ACRIDIDAE) (R A NICHOLS, G M HEWITT), In BIOL J LINN SOC, volume 29, 1986. [bib]
[1] Heterochromatin readjusting chiasma distribution in two species of the genus Arcyptera : The effect among individuals and populations (J De Ia Torre, C López-Fernández, R Nichols, J Gosálvez), In Heredity, volume 56, 1986. [bib]
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